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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015914800.1_cds_XP_016464768.1_57778
CDS Infomation

[gene=LOC107787679] [db_xref=GeneID:107787679] [protein=aspartic proteinase-like isoform X2] [protein_id=XP_016464768.1] [location=join(51829..52197,52300..52360,52952..53046,53140..53252,53449..53617,53698..53737,53857..53921,54431..54544,54677..54741,54842..54995,55062..55181,55586..55674,55781..55865)] [gbkey=CDS]
Sequence

ATGGGAGCAAAAGCTTTTCTTGTCACCATTTTACTCTCATCGCTGTTATTTCCTTTGGCC
TTGTCTACGTCAAATGATGGCTTGGTTAGAATTGGACTGAAAAAGATAAAATTTGATCAA
AACAATCGACTTGCTGCACGCGTCGAGTCCAAGGAGGGCGAGGCTGTGAGAGCCTCTATT
AGGAAGTATAATAACTTCCATGGTAATCTTGGGGCCTCTGAGGATACAGACATTGTAGCA
CTGAAGAACTATATGGATGCTCAGTACTTTGGGGAGATTGGTATAGGCTCTCCCCCTCAG
AAGTTCACAGTCATCTTTGATACTGGTAGCTCTAATTTGTGGGTGCCTTCATCAAAGTGC
TACTTCTCAGTTCCCTGTTTTTTCCATTCCAAGTATAAGTCAAGCCAATCAAGCACTTAT
AAGAAAAATGGGAAGTCTGCTGCAATTCGTTATGGTACTGGAGCAATATCTGGATTTTTC
AGTCAAGATAGCGTTAAAGTCGGTGACCTTATTGTGCAAAATCAGGAGTTCATTGAGGCA
ACAAGAGAACCCAGTGTGACTTTTTTGGTAGCCAAGTTTGATGGTATATTGGGTCTTGGT
TTCCAGGAGATTTCTGTTGGAAATGCTGTTCCAGTATGGTACAACATGGTCAAACAGGGT
CTTGTCAAGGAGCCTGTCTTCTCATTTTGGCTCAACCGAAATACAAAGGAAGACGAAGGG
GGCGAAATTGTGTTTGGTGGGGTTGATCCTAACCACTATAAGGGAAAGCACACCTATGTC
CCAGTCACACGGAAAGGTTATTGGCAGTTTGACATGGGTGATGTTCTGATTGATGGTCAA
GCTACTGGTTACTGTGACAATGGATGTTCTGCAATAGCGGATTCTGGGACTTCTCTCTTG
GCTGGTCCAACGACTGTTATCACTATGATTAATCATGCCATTGGCGCCTCGGGGGTTGTA
AGCCAACAATGCAAAGCTGTTGTTGAACAGTATGGACAAACAATAATGGATATGCTTTTA
GCGGAGGCACATCCAAAGAAGATCTGCTCGCAGGTTGGGTTATGCACCTTTGATGGAACT
CGTGGCATTAGTATGGGCATTGAGAGTGTTGTAGATGAGAATGCTGGCAAATCTTCAGGA
CTGCATGATGCTATGTGCTCCGCTTGTGAAATGGCGGTTGTCTGGATGCAGAACCAACTT
AGACAGAACCAGACCCAAGAACGCATCTTGAACTATGTGAATGAGCTTTGCGAGCGACTA
CCAAGCCCAATGGGACAATCTGCTGTTGATTGTGGAAAACTTTCTGGCATGCCTAGTGTT
TCCTTCACAATTGGTGGCAGAACATTTGACCTCTCTCCTGAGGAGTACATACTCAAGGTG
GGCGAGGGTCCTGCTGCACAATGTATTAGTGGCTTCATTGCCTTGGATGTTCCTCCACCC
CGTGGACCTCTCTGGATCTTGGGGGATGTTTTCATGGGTCGATATCACACCGTCTTTGAT
TTTGGCAAACTTAGAGTTGGATTTGCAGAAGCAGCTTAG

Peptide Sequence

PEP ID

XP_016464768.1
PEP Infomation

PREDICTED: aspartic proteinase-like isoform X2 [Nicotiana tabacum]
Sequence

MGAKAFLVTILLSSLLFPLALSTSNDGLVRIGLKKIKFDQNNRLAARVESKEGEAVRASI
RKYNNFHGNLGASEDTDIVALKNYMDAQYFGEIGIGSPPQKFTVIFDTGSSNLWVPSSKC
YFSVPCFFHSKYKSSQSSTYKKNGKSAAIRYGTGAISGFFSQDSVKVGDLIVQNQEFIEA
TREPSVTFLVAKFDGILGLGFQEISVGNAVPVWYNMVKQGLVKEPVFSFWLNRNTKEDEG
GEIVFGGVDPNHYKGKHTYVPVTRKGYWQFDMGDVLIDGQATGYCDNGCSAIADSGTSLL
AGPTTVITMINHAIGASGVVSQQCKAVVEQYGQTIMDMLLAEAHPKKICSQVGLCTFDGT
RGISMGIESVVDENAGKSSGLHDAMCSACEMAVVWMQNQLRQNQTQERILNYVNELCERL
PSPMGQSAVDCGKLSGMPSVSFTIGGRTFDLSPEEYILKVGEGPAAQCISGFIALDVPPP
RGPLWILGDVFMGRYHTVFDFGKLRVGFAEAA

Transcript Sequence

Gene sequence data has not been registered.